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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6445940_6446416_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6445940 - 6446416

Intron Length:

477

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAGATAAT

5'SS Class:

major

3'SS Sequence:

CTTATTTCAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

CTTATTTCAACA

Flanking Amino Acid:

EAKWKIRVEENSKAWMAPET

Intron Amino Acid Position:

160

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.45

1.1

36.4

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

77.6

0.62

0.9

73.5

35.7

Minor 5ss

37.1

-1.5

3.2

Minor BPS

57.2

0.22

1.6

67.56

39.2

Associated Gene:

Gene:

STKLD1

Ensembl Gene ID:

ENSAPLG00000005819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042175

6437469 - 6450460

12992

ENSAPLT00000006028

6437469 - 6450460

12992