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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6446533_6446962_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6446533 - 6446962

Intron Length:

430

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

ATTTGTGTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

CTGATCTCACAT

Flanking Amino Acid:

FYIHKQNILHRNLKPSNILV

Intron Amino Acid Position:

121

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.99

0.7

83.2

30.8

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

79.8

0.67

73.4

41.3

Minor 5ss

29.7

-2.3

2.6

33.7

41.6

Minor BPS

43.4

-0.4

1.9

57.48

45.1

Associated Gene:

Gene:

STKLD1

Ensembl Gene ID:

ENSAPLG00000005819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042175

6437469 - 6450460

12992

ENSAPLT00000006028

6437469 - 6450460

12992