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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6447034_6447472_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6447034 - 6447472

Intron Length:

439

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAAACGT

5'SS Class:

major

3'SS Sequence:

TACCTGTCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAC

U12 Branch Point Sequence:

TTTGTGTTACAT

Flanking Amino Acid:

RQKSEKIADMVMVKFLGQMV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

61.5

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

67.4

0.39

61.8

38.5

Minor 5ss

33.2

-1.9

3.3

45.2

44.6

Minor BPS

-0.2

2.4

72.05

45.1

Associated Gene:

Gene:

STKLD1

Ensembl Gene ID:

ENSAPLG00000005819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042175

6437469 - 6450460

12992

ENSAPLT00000006028

6437469 - 6450460

12992