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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6450024_6450445_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6450024 - 6450445

Intron Length:

422

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGTCCTG

5'SS Class:

major

3'SS Sequence:

CTCTGCCCAGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGTTAAT

U12 Branch Point Sequence:

GATGCGTTAATA

Flanking Amino Acid:

MEGYEVLEQLQPGAL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.5

0.32

1.1

52.5

Major BPS

0.55

1.2

73.3

39.1

Major PPT

68.3

0.41

0.9

62.9

33.1

Minor 5ss

34.7

-1.7

3.4

46.8

48.6

Minor BPS

52.6

0.08

2.1

65.04

41.6

Associated Gene:

Gene:

STKLD1

Ensembl Gene ID:

ENSAPLG00000005819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042175

6437469 - 6450460

12992

ENSAPLT00000006028

6437469 - 6450460

12992