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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6459599_6460215_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6459599 - 6460215

Intron Length:

617

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGGC

5'SS Class:

major

3'SS Sequence:

GTTCTTTGCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TGTTAATTAACT

Flanking Amino Acid:

FGLFGIIALQTIAYSILWDL

Intron Amino Acid Position:

102

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

65.2

40.3

Major BPS

84.4

0.85

34.5

Major PPT

71.4

0.48

0.9

65.3

41.1

Minor 5ss

29.4

-2.4

3.5

41.3

45.4

Minor BPS

68.9

0.67

1.8

87.66

36.7

Associated Gene:

Gene:

SURF4

Ensembl Gene ID:

ENSAPLG00000005704

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005919

6455257 - 6461961

6705