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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6465950_6466543_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6465950 - 6466543

Intron Length:

594

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTGAGTAAG

5'SS Class:

major

3'SS Sequence:

CTTTGTATTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTGAT

U12 Branch Point Sequence:

ATCTTTGTATTT

Flanking Amino Acid:

TDDSMSDLYPPELFPEKSPA

Intron Amino Acid Position:

180

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

1.3

38.4

Major BPS

74.7

0.61

0.9

63.4

35.6

Major PPT

80.1

0.68

0.8

78.1

Minor 5ss

-2.2

2.6

32.6

Minor BPS

45.6

-0.2

2.1

64.63

41.3

Associated Gene:

Gene:

SURF2

Ensembl Gene ID:

ENSAPLG00000005587

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005788

6464926 - 6467856

2931