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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6467285_6467443_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6467285 - 6467443

Intron Length:

159

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGCGTATT

5'SS Class:

major

3'SS Sequence:

TTCTTTCTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

TCCTTCTTGCCT

Flanking Amino Acid:

EPHIVPSTKNLHQLFCKLTL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.7

0.35

1.1

71.4

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

88.8

0.87

0.6

88.2

21.6

Minor 5ss

38.1

-1.3

3.3

60.5

Minor BPS

45.9

-0.2

3.5

73.89

43.7

Associated Gene:

Gene:

SURF2

Ensembl Gene ID:

ENSAPLG00000005587

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005788

6464926 - 6467856

2931