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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6467599_6467775_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6467599 - 6467775

Intron Length:

177

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCCGG

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTCCGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTCCAT

U12 Branch Point Sequence:

TTTTCTCCATCC

Flanking Amino Acid:

PLLGVAEPGKVRCRLTGHEL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

59.7

46.7

Major BPS

64.7

0.37

1.3

74.7

Major PPT

72.1

0.5

65.9

Minor 5ss

31.8

-2.1

38.6

46.5

Minor BPS

49.2

-0

2.1

71.36

39.9

Associated Gene:

Gene:

SURF2

Ensembl Gene ID:

ENSAPLG00000005587

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005788

6464926 - 6467856

2931