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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6470630_6471136_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6470630 - 6471136

Intron Length:

507

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TGTGTAACTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

GTCTGTGTAACT

Flanking Amino Acid:

VITPFYCTELGVTILVNRGF

Intron Amino Acid Position:

157

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.9

80.2

30.6

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

66.6

0.37

56.9

43.5

Minor 5ss

39.1

-1.2

2.8

40.8

45.4

Minor BPS

48.4

-0

2.4

71.8

45.5

Associated Gene:

Gene:

SURF1

Ensembl Gene ID:

ENSAPLG00000005581

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005766

6468562 - 6476381

7820