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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6471210_6471376_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6471210 - 6471376

Intron Length:

167

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

CACTTCTCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTGAC

U12 Branch Point Sequence:

CTCCTCTGCACT

Flanking Amino Acid:

LKPETRLKGQIEDEIDLTGV

Intron Amino Acid Position:

182

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

73.9

0.59

65.3

41.6

Major PPT

80.1

0.68

0.8

31.3

Minor 5ss

31.7

-2.1

3.1

39.7

45.9

Minor BPS

47.5

-0.1

1.9

65.4

45.2

Associated Gene:

Gene:

SURF1

Ensembl Gene ID:

ENSAPLG00000005581

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005766

6468562 - 6476381

7820