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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6472053_6476335_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6472053 - 6476335

Intron Length:

4283

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAA|GCAAGGGAG

5'SS Class:

major

3'SS Sequence:

CCTAAGTCAAGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

CTTTCCTGACAC

Flanking Amino Acid:

QYIVSTAFCWKILWGTPLPV

Intron Amino Acid Position:

268

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

1.1

68.4

40.2

Major BPS

68.9

0.47

59.2

39.1

Major PPT

45.7

-0.2

1.7

46.4

Minor 5ss

-3.5

4.1

28.5

37.7

Minor BPS

53.9

0.1

1.9

68.51

42.7

Associated Gene:

Gene:

SURF1

Ensembl Gene ID:

ENSAPLG00000005581

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005766

6468562 - 6476381

7820