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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6474680_6475016_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6474680 - 6475016

Intron Length:

337

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCATC

5'SS Class:

strong_major

3'SS Sequence:

TGTCTCTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATAAA

U12 Branch Point Sequence:

TTCTCCTTCAGT

Flanking Amino Acid:

VIAHDVDPIELVVFLPALCR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.7

0.98

0.8

85.3

32.2

Major BPS

63.5

0.33

1.2

64.3

39.6

Major PPT

85.2

0.79

0.8

37.2

Minor 5ss

43.9

-0.7

2.9

60.2

44.5

Minor BPS

63.8

0.51

2.1

83.36

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005247

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005479

6473442 - 6475121

1680