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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6489085_6489506_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6489085 - 6489506

Intron Length:

422

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGGGAA

5'SS Class:

major

3'SS Sequence:

CTTTGCCTTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTCGAT

U12 Branch Point Sequence:

TTTTCCTTTGCC

Flanking Amino Acid:

ERPQPRKRKPVSKPGQAGNG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

65.3

36.2

Major BPS

58.6

0.21

1.4

58.2

48.3

Major PPT

78.5

0.64

0.8

36.5

Minor 5ss

22.6

-3.2

3.2

19.8

37.9

Minor BPS

49.2

-0

3.6

82.88

37.2

Associated Gene:

Gene:

SURF6

Ensembl Gene ID:

ENSAPLG00000005069

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005226

6488889 - 6491516

2628