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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6493900_6494441_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6493900 - 6494441

Intron Length:

542

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAAATTT

5'SS Class:

major

3'SS Sequence:

TCTTTCTTGACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TCTTTCTTGACA

Flanking Amino Acid:

EEVRALPDFVVPEETRSNIT

Intron Amino Acid Position:

113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

76.6

32.7

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

82.4

0.73

0.9

79.7

32.4

Minor 5ss

43.4

-0.7

3.3

61.7

44.2

Minor BPS

0.91

1.1

81.71

33.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024237

6492107 - 6575678

83572

ENSAPLT00000005021

6492107 - 6515391

23285