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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6495029_6495916_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6495029 - 6495916

Intron Length:

888

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGGTGT

5'SS Class:

major

3'SS Sequence:

TTTTATTGTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TGTTCTTTATTT

Flanking Amino Acid:

KKVEWSRTDKVTDVLRKYTV

Intron Amino Acid Position:

228

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

69.3

37.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

84.7

0.78

0.9

80.8

36.4

Minor 5ss

34.7

-1.7

3.4

46.6

43.3

Minor BPS

70.4

0.72

1.5

84.38

36.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024237

6492107 - 6575678

83572

ENSAPLT00000005021

6492107 - 6515391

23285