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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6496013_6496265_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6496013 - 6496265

Intron Length:

253

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTAATACACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TATATTTTAATA

Flanking Amino Acid:

IYRFINNEAMLINRALLANQ

Intron Amino Acid Position:

260

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

75.4

0.57

39.3

Minor 5ss

40.3

-1.1

3.1

56.2

42.2

Minor BPS

68.5

0.58

1.2

72.59

33.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024237

6492107 - 6575678

83572

ENSAPLT00000005021

6492107 - 6515391

23285