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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6497505_6498187_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6497505 - 6498187

Intron Length:

683

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

CCATATCCTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTTTCCATATCC

Flanking Amino Acid:

KSLENLNQSMDAHNRQCMMK

Intron Amino Acid Position:

381

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

69.7

43.7

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

73.8

0.54

0.9

69.8

36.1

Minor 5ss

39.2

-1.2

2.8

45.3

Minor BPS

67.7

0.53

1.9

83.62

35.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024237

6492107 - 6575678

83572

ENSAPLT00000005021

6492107 - 6515391

23285