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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6498277_6498965_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6498277 - 6498965

Intron Length:

689

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTATC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTCGTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTATAT

U12 Branch Point Sequence:

AATAGCTTAACC

Flanking Amino Acid:

KCLAEVQLYKNKLLNLNVCT

Intron Amino Acid Position:

411

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

1.2

85.3

32.2

Major BPS

70.4

0.51

67.1

39.4

Major PPT

85.3

0.8

84.6

30.3

Minor 5ss

35.7

-1.6

2.7

45.8

42.3

Minor BPS

62.7

0.38

1.8

71.12

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005021

6492107 - 6515391

23285

ENSAPLT00000024237

6492107 - 6575678

83572