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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6499089_6499346_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6499089 - 6499346

Intron Length:

258

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTATGTTTA

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTAAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTGAT

U12 Branch Point Sequence:

GTTCACTTAAAT

Flanking Amino Acid:

QFEEELKNMDRDFEELAKQN

Intron Amino Acid Position:

452

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.66

78.8

30.7

Major BPS

82.5

0.81

0.8

71.4

36.6

Major PPT

88.4

0.86

0.9

94.6

18.5

Minor 5ss

58.1

0.27

2.3

70.8

39.9

Minor BPS

65.3

0.56

1.6

81.39

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024237

6492107 - 6575678

83572

ENSAPLT00000005021

6492107 - 6515391

23285