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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6499893_6500624_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6499893 - 6500624

Intron Length:

732

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGAATT

5'SS Class:

strong_major

3'SS Sequence:

TTAAATTTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

ACGACTTTAAAT

Flanking Amino Acid:

ALSSLNDIRARYETFNKVLV

Intron Amino Acid Position:

548

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.8

86.3

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

69.6

0.44

1.1

45.1

Minor 5ss

45.5

-0.5

2.9

66.2

44.9

Minor BPS

59.1

0.36

1.5

68.14

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024237

6492107 - 6575678

83572

ENSAPLT00000005021

6492107 - 6515391

23285