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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6501028_6501129_F

Intron Information:

Intron Rank:

Intron Class:

major_hybrid

Intron Phase:

Intron Coordinates:

6501028 - 6501129

Intron Length:

102

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTCCT

5'SS Class:

strong_major

3'SS Sequence:

TGGAAATAATTAG|T

3'SS Class:

major_hybrid

U2 Branch Point Sequence:

CTTTAAC

U12 Branch Point Sequence:

TTTGCTTTAACT

Flanking Amino Acid:

GKIDFVFQGQVEVLEAESLV

Intron Amino Acid Position:

604

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.83

0.9

77.3

37.6

Major BPS

77.3

0.68

79.3

29.4

Major PPT

49.5

-0

1.1

45.9

44.8

Minor 5ss

36.9

-1.5

2.9

51.8

44.6

Minor BPS

84.1

1.15

1.2

95.57

31.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024237

6492107 - 6575678

83572

ENSAPLT00000005021

6492107 - 6515391

23285