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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6504149_6504675_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6504149 - 6504675

Intron Length:

527

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TATTTGCTGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

GTTTTATTATTT

Flanking Amino Acid:

SVFLTAPMTEKLVSFSNSLH

Intron Amino Acid Position:

870

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

35.3

Major BPS

84.7

0.86

74.3

40.7

Major PPT

68.8

0.42

62.7

43.9

Minor 5ss

-1.4

3.3

49.5

41.1

Minor BPS

56.6

0.29

1.8

77.46

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024237

6492107 - 6575678

83572

ENSAPLT00000005021

6492107 - 6515391

23285