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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6505227_6505446_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6505227 - 6505446

Intron Length:

220

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGTGCA

5'SS Class:

strong_major

3'SS Sequence:

GACATTTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATCAT

U12 Branch Point Sequence:

TGTTTCTGACAT

Flanking Amino Acid:

EKMESSCLEQATELINQAET

Intron Amino Acid Position:

968

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

72.9

31.4

Major BPS

88.2

0.95

0.9

88.3

28.5

Major PPT

0.31

1.1

62.8

41.9

Minor 5ss

33.6

-1.9

41.1

45.4

Minor BPS

52.4

0.15

1.8

74.71

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024237

6492107 - 6575678

83572

ENSAPLT00000005021

6492107 - 6515391

23285