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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6505564_6505973_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6505564 - 6505973

Intron Length:

410

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACAAACT

5'SS Class:

major

3'SS Sequence:

TTTCTGGTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAC

U12 Branch Point Sequence:

TTTTACTTCACC

Flanking Amino Acid:

SNLQLQIKSEVANSNLQAVT

Intron Amino Acid Position:

1007

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

71.6

38.1

Major BPS

77.8

0.69

0.9

69.4

37.3

Major PPT

0.65

0.9

77.1

37.1

Minor 5ss

34.4

-1.8

3.3

50.3

45.7

Minor BPS

68.8

0.58

1.9

83.56

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024237

6492107 - 6575678

83572

ENSAPLT00000005021

6492107 - 6515391

23285