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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6506073_6506430_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6506073 - 6506430

Intron Length:

358

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

ACATATCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

CCTGTATTAACA

Flanking Amino Acid:

TCAHSTADKEALTSEELYNF

Intron Amino Acid Position:

1040

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

84.2

27.2

Major BPS

81.9

0.79

0.8

81.9

Major PPT

74.5

0.55

0.9

70.2

40.2

Minor 5ss

44.5

-0.6

2.8

38.4

Minor BPS

54.5

0.14

1.8

63.34

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024237

6492107 - 6575678

83572

ENSAPLT00000005021

6492107 - 6515391

23285