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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6507563_6508354_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6507563 - 6508354

Intron Length:

792

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGCTAG

5'SS Class:

strong_major

3'SS Sequence:

ATTAAATATAAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTCTTATTAAAT

Flanking Amino Acid:

RNVFSHSLGPAILPTPKNSH

Intron Amino Acid Position:

1171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

67.6

40.3

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

55.9

0.13

1.2

43.6

Minor 5ss

49.3

-0

2.5

63.6

48.1

Minor BPS

64.7

0.54

1.7

82.05

39.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024237

6492107 - 6575678

83572

ENSAPLT00000005021

6492107 - 6515391

23285