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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6508485_6509046_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6508485 - 6509046

Intron Length:

562

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATGT

5'SS Class:

strong_major

3'SS Sequence:

TTTGCCTTCTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAT

U12 Branch Point Sequence:

TTCAAATTAATT

Flanking Amino Acid:

SSISKKMPRGSIQKHTRPVL

Intron Amino Acid Position:

1214

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

81.6

33.2

Major BPS

0.82

0.8

24.9

Major PPT

78.8

0.65

0.8

77.5

31.2

Minor 5ss

39.7

-1.2

3.1

56.6

47.5

Minor BPS

55.2

0.24

1.8

75.06

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005021

6492107 - 6515391

23285

ENSAPLT00000024237

6492107 - 6575678

83572