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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6509122_6509419_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6509122 - 6509419

Intron Length:

298

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAGTCAA

5'SS Class:

major

3'SS Sequence:

TTATTATTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTTATT

Flanking Amino Acid:

QIFGEKPPESDTFKGIIMNI

Intron Amino Acid Position:

1239

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

1.1

67.9

39.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

87.5

0.84

0.8

85.6

33.6

Minor 5ss

34.8

-1.7

2.9

37.7

40.9

Minor BPS

69.2

0.69

1.5

86.8

32.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005021

6492107 - 6515391

23285

ENSAPLT00000024237

6492107 - 6575678

83572