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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6509487_6510248_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6509487 - 6510248

Intron Length:

762

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TACCTCCTGAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTATCAA

U12 Branch Point Sequence:

TTATCTTTACCT

Flanking Amino Acid:

GNNNLLSLAEEFYQKEKRQM

Intron Amino Acid Position:

1262

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.7

23.7

Major BPS

0.72

80.3

31.7

Major PPT

58.1

0.18

1.1

59.5

35.7

Minor 5ss

32.8

-2

2.9

39.7

45.8

Minor BPS

74.1

0.83

1.5

88.57

36.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024237

6492107 - 6575678

83572

ENSAPLT00000005021

6492107 - 6515391

23285