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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6513416_6513975_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6513416 - 6513975

Intron Length:

560

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATATTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTTAAG

Flanking Amino Acid:

KVEQLIERGSRTWPGIPMTT

Intron Amino Acid Position:

1481

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

83.5

28.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

88.4

0.86

0.9

94.6

18.5

Minor 5ss

43.9

-0.7

3.1

65.3

45.8

Minor BPS

56.3

0.05

1.8

67.7

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024237

6492107 - 6575678

83572

ENSAPLT00000005021

6492107 - 6515391

23285