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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6514115_6515259_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6514115 - 6515259

Intron Length:

1145

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGGTCTG

5'SS Class:

major

3'SS Sequence:

GTTATTTCTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

TTGCTACTAATT

Flanking Amino Acid:

AVEARDAVYKKYMYNFEQQF

Intron Amino Acid Position:

1528

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.2

64.8

46.6

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

82.9

0.74

0.9

76.7

37.4

Minor 5ss

32.8

-2

3.1

41.2

45.2

Minor BPS

48.7

-0

1.9

71.03

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005021

6492107 - 6515391

23285