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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6518399_6519376_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6518399 - 6519376

Intron Length:

978

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCATT

5'SS Class:

strong_major

3'SS Sequence:

CTATCACTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

CTGTCTTAAAAT

Flanking Amino Acid:

VCLSVVITLIWITVGNGKVH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

83.5

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

76.8

0.6

0.9

69.5

35.6

Minor 5ss

45.5

-0.5

2.9

63.6

Minor BPS

56.3

0.27

1.8

72.41

44.8

Associated Gene:

Gene:

GBGT1

Ensembl Gene ID:

ENSAPLG00000004843

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004982

6518286 - 6524099

5814