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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6577488_6578422_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6577488 - 6578422

Intron Length:

935

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTTAGTGCC

5'SS Class:

major

3'SS Sequence:

CCTTGTTTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAAGCAA

U12 Branch Point Sequence:

TTTGCCTTGTTT

Flanking Amino Acid:

DYFYRPDTQHRDGYNNPQVS

Intron Amino Acid Position:

110

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

1.2

65.7

38.6

Major BPS

-0.3

1.2

49.8

35.1

Major PPT

75.7

0.58

0.8

68.5

37.3

Minor 5ss

30.8

-2.2

38.8

Minor BPS

47.4

-0.1

3.5

82.57

39.6

Associated Gene:

Gene:

GTF3C5

Ensembl Gene ID:

ENSAPLG00000003782

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003891

6571904 - 6579430

7527