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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6578622_6578849_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6578622 - 6578849

Intron Length:

228

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATACCT

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTCTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GGTGTTTTAATG

Flanking Amino Acid:

GIVTTVYKFQGMSDFQYLAM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

84.1

0.77

0.7

79.4

26.2

Minor 5ss

34.7

-1.7

3.2

49.7

46.1

Minor BPS

55.6

0.04

1.5

55.78

40.4

Associated Gene:

Gene:

GTF3C5

Ensembl Gene ID:

ENSAPLG00000003782

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003891

6571904 - 6579430

7527