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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6631339_6631914_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6631339 - 6631914

Intron Length:

576

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATAAA

5'SS Class:

strong_major

3'SS Sequence:

AATCCTCTCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAA

U12 Branch Point Sequence:

TTTTCTACCACT

Flanking Amino Acid:

LSTLQEPHDKHLLDKINEYM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.91

0.8

85.6

24.6

Major BPS

0.57

73.6

28.6

Major PPT

73.7

0.53

0.9

35.4

Minor 5ss

34.4

-1.8

2.8

41.8

44.8

Minor BPS

49.8

0.06

2.2

81.08

40.7

Associated Gene:

Gene:

TSC1

Ensembl Gene ID:

ENSAPLG00000002487

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002539

6630247 - 6648491

18245