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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6636938_6637390_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6636938 - 6637390

Intron Length:

453

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGATCT

5'SS Class:

strong_major

3'SS Sequence:

CTTAAACTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

ATTTCTTAAACT

Flanking Amino Acid:

SHYIDTQSSYGTSTPYSTPR

Intron Amino Acid Position:

306

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

76.9

32.3

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

75.4

0.57

0.9

70.5

39.8

Minor 5ss

40.7

-1

3.1

54.8

43.3

Minor BPS

74.9

0.86

1.6

90.07

34.1

Associated Gene:

Gene:

TSC1

Ensembl Gene ID:

ENSAPLG00000002487

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002539

6630247 - 6648491

18245