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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6642707_6643414_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6642707 - 6643414

Intron Length:

708

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGATG

5'SS Class:

strong_major

3'SS Sequence:

AACTCCAATCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

ATTTCAGTAACC

Flanking Amino Acid:

SKSADWTHFGGSPPSDEIHT

Intron Amino Acid Position:

684

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.8

78.6

37.3

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

62.9

0.29

52.5

40.9

Minor 5ss

30.4

-2.2

3.2

38.7

46.6

Minor BPS

59.2

0.27

2.2

78.19

37.1

Associated Gene:

Gene:

TSC1

Ensembl Gene ID:

ENSAPLG00000002487

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002539

6630247 - 6648491

18245