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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6656203_6656642_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6656203 - 6656642

Intron Length:

440

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAGGTCTT

5'SS Class:

major

3'SS Sequence:

TTCTGTGCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

GCTCTGCTGACT

Flanking Amino Acid:

HSNDLSTIRAKYPHDVVNHL

Intron Amino Acid Position:

132

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

75.5

40.6

Major BPS

66.3

0.4

1.1

41.8

Major PPT

74.3

0.55

0.9

68.8

37.1

Minor 5ss

40.5

-1.1

3.4

58.6

40.3

Minor BPS

-0.4

2.3

61.62

42.3

Associated Gene:

Gene:

SPACA9

Ensembl Gene ID:

ENSAPLG00000002446

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002453

6652072 - 6657213

5142