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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6673788_6680423_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6673788 - 6680423

Intron Length:

6636

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTTCAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTGTTCAACA

Flanking Amino Acid:

RLSNVDCIKQGWILEGFPEN

Intron Amino Acid Position:

120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

87.4

26.6

Major BPS

100

1.24

0.5

100

Major PPT

81.4

0.71

0.9

77.7

35.5

Minor 5ss

41.1

-1

3.2

58.9

39.4

Minor BPS

62.8

0.4

79.34

37.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002249

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002296

6662658 - 6730065

67408