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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6683490_6686235_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6683490 - 6686235

Intron Length:

2746

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATTTG

5'SS Class:

strong_major

3'SS Sequence:

TGTCATGTTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATAAA

U12 Branch Point Sequence:

TAAACCGTATTT

Flanking Amino Acid:

DQPCMDVISQALTYVQTRHR

Intron Amino Acid Position:

238

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

81.2

33.8

Major BPS

69.8

0.49

70.3

31.8

Major PPT

70.9

0.47

44.1

Minor 5ss

43.2

-0.7

2.9

57.8

46.8

Minor BPS

46.7

-0.1

2.2

66.83

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002249

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002296

6662658 - 6730065

67408