Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_18_6754526_6755284_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6754526 - 6755284

Intron Length:

759

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAAAC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTTAATCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TTGTTTTTAATC

Flanking Amino Acid:

GGEKRKSEKARLRKGINILV

Intron Amino Acid Position:

234

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

76.8

31.7

Major BPS

87.3

0.93

0.8

36.5

Major PPT

78.1

0.63

78.8

38.7

Minor 5ss

39.9

-1.1

2.8

51.4

45.5

Minor BPS

74.9

0.76

1.1

77.11

33.4

Associated Gene:

Gene:

DDX31

Ensembl Gene ID:

ENSAPLG00000016396

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017116

6746826 - 6793293

46468