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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6757351_6758908_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6757351 - 6758908

Intron Length:

1558

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGCACT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTGCTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

ACACGCTTAATT

Flanking Amino Acid:

LRLHGNMEQEERTEVFQEFL

Intron Amino Acid Position:

445

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

78.2

36.3

Major BPS

84.4

0.85

1.1

34.5

Major PPT

0.7

0.8

74.1

36.7

Minor 5ss

43.7

-0.7

2.9

59.5

38.8

Minor BPS

0.27

1.8

68.59

42.4

Associated Gene:

Gene:

DDX31

Ensembl Gene ID:

ENSAPLG00000016396

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017116

6746826 - 6793293

46468