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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6835220_6836312_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6835220 - 6836312

Intron Length:

1093

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGGGGC

5'SS Class:

major

3'SS Sequence:

TAATCACTACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

TTCATTTTAAGA

Flanking Amino Acid:

PADMTYGMPARKITATNSRE

Intron Amino Acid Position:

169

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

64.8

41.3

Major BPS

0.75

78.6

Major PPT

65.4

0.35

56.8

Minor 5ss

30.1

-2.3

3.5

41.6

45.3

Minor BPS

57.4

0.23

1.7

66.81

40.3

Associated Gene:

Gene:

CFAP77

Ensembl Gene ID:

ENSAPLG00000016385

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017100

6835183 - 6878258

43076