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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6836542_6837087_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6836542 - 6837087

Intron Length:

546

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGACAA

5'SS Class:

strong_major

3'SS Sequence:

CTTCCATCTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTAAT

U12 Branch Point Sequence:

TCTTCTTCCATC

Flanking Amino Acid:

IERTDGGVPEAIGHWNTIKP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

69.6

36.5

Major BPS

69.6

0.49

1.1

69.5

Major PPT

79.1

0.66

0.8

69.9

35.5

Minor 5ss

37.4

-1.4

47.2

48.2

Minor BPS

50.5

-0

1.9

65.76

40.9

Associated Gene:

Gene:

CFAP77

Ensembl Gene ID:

ENSAPLG00000016385

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017100

6835183 - 6878258

43076