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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6837188_6874974_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6837188 - 6874974

Intron Length:

37787

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCCCC

5'SS Class:

strong_major

3'SS Sequence:

CATTCTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TCTCCTTTAACT

Flanking Amino Acid:

SMLRNPRILKAELGKPQRNC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

65.8

40.2

Major BPS

83.9

0.84

73.9

41.3

Major PPT

82.8

0.74

0.8

77.1

31.1

Minor 5ss

33.7

-1.9

42.6

44.4

Minor BPS

80.8

1.05

1.1

89.23

35.4

Associated Gene:

Gene:

CFAP77

Ensembl Gene ID:

ENSAPLG00000016385

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017100

6835183 - 6878258

43076