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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6875104_6878210_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6875104 - 6878210

Intron Length:

3107

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGTCCTGA

5'SS Class:

weak_major

3'SS Sequence:

GGAGGAGGAGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCGCCAT

U12 Branch Point Sequence:

TTCTCCGCCATG

Flanking Amino Acid:

SGPSLTLWVLEEEAEGGGPP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.9

0.12

1.2

47.3

39.5

Major BPS

-0.3

1.4

49.7

Major PPT

36.5

-0.7

1.6

21.2

35.9

Minor 5ss

49.5

-0

2.5

61.6

45.2

Minor BPS

42.5

-0.7

2.5

54.83

46.9

Associated Gene:

Gene:

CFAP77

Ensembl Gene ID:

ENSAPLG00000016385

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017100

6835183 - 6878258

43076