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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6878451_6878896_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6878451 - 6878896

Intron Length:

446

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGACCC

5'SS Class:

strong_major

3'SS Sequence:

CTGTATATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

AATTTTTTAATA

Flanking Amino Acid:

LMRFKEFKKQGIPIKFGRFS

Intron Amino Acid Position:

380

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

68.6

36.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

73.3

0.52

0.9

70.6

39.6

Minor 5ss

27.8

-2.5

2.9

34.2

41.4

Minor BPS

72.7

0.71

74.2

30.9

Associated Gene:

Gene:

TTF1

Ensembl Gene ID:

ENSAPLG00000016383

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017099

6876304 - 6883855

7552