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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6880562_6880842_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6880562 - 6880842

Intron Length:

281

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCCAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTACCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGAAT

U12 Branch Point Sequence:

TTTTTTCTACCA

Flanking Amino Acid:

KMFDSNNYKGRYTKEEKEKL

Intron Amino Acid Position:

468

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

68.8

43.8

Major BPS

74.6

0.61

1.4

34.5

Major PPT

87.4

0.84

0.8

82.4

Minor 5ss

37.2

-1.4

46.7

48.6

Minor BPS

55.9

0.18

1.9

75.11

36.7

Associated Gene:

Gene:

TTF1

Ensembl Gene ID:

ENSAPLG00000016383

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017099

6876304 - 6883855

7552