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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6882139_6882359_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6882139 - 6882359

Intron Length:

221

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGTTC

5'SS Class:

major

3'SS Sequence:

GTTACGTTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTGAA

U12 Branch Point Sequence:

GTTACGTTCACA

Flanking Amino Acid:

GLQAKINLIKRLYEMKVEDA

Intron Amino Acid Position:

618

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.1

67.4

38.9

Major BPS

74.6

0.61

65.6

41.4

Major PPT

71.9

0.49

64.4

41.4

Minor 5ss

39.6

-1.2

3.6

58.4

46.5

Minor BPS

48.8

-0.1

2.5

68.83

43.3

Associated Gene:

Gene:

TTF1

Ensembl Gene ID:

ENSAPLG00000016383

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017099

6876304 - 6883855

7552