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Intron Name: Anas_platyrhynchos_platyrhynchos_18_6883180_6883676_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6883180 - 6883676

Intron Length:

497

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTCAGTATT

5'SS Class:

major

3'SS Sequence:

CTTTTTTTCAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAGAC

U12 Branch Point Sequence:

TTTTTTTCAAAG

Flanking Amino Acid:

VPLWQKKTFSEIIDYLFEEK

Intron Amino Acid Position:

669

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.3

83.5

Major BPS

57.5

0.19

1.1

55.1

40.5

Major PPT

79.1

0.66

81.5

27.8

Minor 5ss

37.2

-1.4

2.9

49.2

40.8

Minor BPS

59.2

0.15

1.7

68.37

39.3

Associated Gene:

Gene:

TTF1

Ensembl Gene ID:

ENSAPLG00000016383

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017099

6876304 - 6883855

7552